CI(macos): build source deps from source with caching

Add a CI step to build GTSAM 4.2.1, libnabo 1.1.2 and libpointmatcher
1.4.4 from source (not available/usable from Homebrew), with patches
under .github/patches fixing Eigen 5 / Boost compatibility.

Installs are staged via DESTDIR into an actions/cache directory and
copied into /usr/local. The cache key includes the pinned versions, the
patch hashes, and the linked Homebrew (eigen/boost/yaml-cpp) + Xcode
toolchain versions, so the deps rebuild only when something relevant
changes. Also add yaml-cpp brew dep and drop the unused extra_deps
matrix field.

Co-Authored-By: Claude Opus 4.8 (1M context) <[email protected]>
This commit is contained in:
matlabbe
2026-06-27 14:45:09 -07:00
co-authored by Claude Opus 4.8
parent 3bc13cab98
commit febbb49523
4 changed files with 284 additions and 5 deletions
+83
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@@ -0,0 +1,83 @@
diff --git a/cmake/HandleEigen.cmake b/cmake/HandleEigen.cmake
index b3b4f66b6..651cd1009 100644
--- a/cmake/HandleEigen.cmake
+++ b/cmake/HandleEigen.cmake
@@ -59,7 +59,12 @@ else()
endif()
# Detect Eigen version:
-set(EIGEN_VER_H "${GTSAM_EIGEN_INCLUDE_FOR_BUILD}/Eigen/src/Core/util/Macros.h")
+# Since Eigen 5.0.0 the version macros moved from Eigen/src/Core/util/Macros.h
+# to a dedicated Eigen/Version header, so check the new location first.
+set(EIGEN_VER_H "${GTSAM_EIGEN_INCLUDE_FOR_BUILD}/Eigen/Version")
+if (NOT EXISTS ${EIGEN_VER_H})
+ set(EIGEN_VER_H "${GTSAM_EIGEN_INCLUDE_FOR_BUILD}/Eigen/src/Core/util/Macros.h")
+endif()
if (EXISTS ${EIGEN_VER_H})
file(READ "${EIGEN_VER_H}" STR_EIGEN_VERSION)
diff --git a/gtsam/base/Matrix.h b/gtsam/base/Matrix.h
index cfedf6d8c..9c9771407 100644
--- a/gtsam/base/Matrix.h
+++ b/gtsam/base/Matrix.h
@@ -54,7 +54,7 @@ using Matrix7##N = Eigen::Matrix<double, 7, N>; \
using Matrix8##N = Eigen::Matrix<double, 8, N>; \
using Matrix9##N = Eigen::Matrix<double, 9, N>; \
static const Eigen::MatrixBase<Matrix##N>::IdentityReturnType I_##N##x##N = Matrix##N::Identity(); \
-static const Eigen::MatrixBase<Matrix##N>::ConstantReturnType Z_##N##x##N = Matrix##N::Zero();
+static const decltype(Matrix##N::Zero()) Z_##N##x##N = Matrix##N::Zero();
GTSAM_MAKE_MATRIX_DEFS(1)
GTSAM_MAKE_MATRIX_DEFS(2)
diff --git a/gtsam/base/Vector.h b/gtsam/base/Vector.h
index f7923ff88..5410393f6 100644
--- a/gtsam/base/Vector.h
+++ b/gtsam/base/Vector.h
@@ -27,6 +27,7 @@
#include <gtsam/global_includes.h>
#include <Eigen/Core>
+#include <cassert>
#include <iosfwd>
#include <list>
@@ -42,14 +43,14 @@ typedef Eigen::Matrix<double, 1, 1> Vector1;
typedef Eigen::Vector2d Vector2;
typedef Eigen::Vector3d Vector3;
-static const Eigen::MatrixBase<Vector2>::ConstantReturnType Z_2x1 = Vector2::Zero();
-static const Eigen::MatrixBase<Vector3>::ConstantReturnType Z_3x1 = Vector3::Zero();
+static const decltype(Vector2::Zero()) Z_2x1 = Vector2::Zero();
+static const decltype(Vector3::Zero()) Z_3x1 = Vector3::Zero();
// Create handy typedefs and constants for vectors with N>3
// VectorN and Z_Nx1, for N=1..9
#define GTSAM_MAKE_VECTOR_DEFS(N) \
using Vector##N = Eigen::Matrix<double, N, 1>; \
- static const Eigen::MatrixBase<Vector##N>::ConstantReturnType Z_##N##x1 = Vector##N::Zero();
+ static const decltype(Vector##N::Zero()) Z_##N##x1 = Vector##N::Zero();
GTSAM_MAKE_VECTOR_DEFS(4)
GTSAM_MAKE_VECTOR_DEFS(5)
diff --git a/gtsam/linear/iterative.h b/gtsam/linear/iterative.h
index 22f65b8de..20a0c936e 100644
--- a/gtsam/linear/iterative.h
+++ b/gtsam/linear/iterative.h
@@ -61,7 +61,7 @@ namespace gtsam {
/** Apply operator A'*e */
Vector operator^(const Vector& e) const {
- return A_ ^ e;
+ return gtsam::operator^(A_, e);
}
/**
@@ -71,7 +71,7 @@ namespace gtsam {
/** gradient of objective function 0.5*|Ax-b_|^2 at x = A_'*(Ax-b_) */
Vector gradient(const Vector& x) const {
- return A() ^ (A() * x - b());
+ return gtsam::operator^(A(), Vector(A() * x - b()));
}
/** Apply operator A */
+87
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@@ -0,0 +1,87 @@
diff --git a/CMakeLists.txt b/CMakeLists.txt
index a5f0c44..69340e4 100644
--- a/CMakeLists.txt
+++ b/CMakeLists.txt
@@ -78,18 +78,18 @@ elseif ()
endif ()
endif ()
-# enable C++11 support.
+# enable C++14 support (required by recent Eigen versions).
if (CMAKE_VERSION VERSION_LESS "3.1")
if (MSVC)
message(FATAL_ERROR "CMake version 3.1 or later is required to compile ${PROJECT_NAME} with Microsoft Visual C++")
endif ()
if (CMAKE_CXX_COMPILER_ID STREQUAL "GNU")
- set (CMAKE_CXX_FLAGS "-std=c++0x ${CMAKE_CXX_FLAGS}")
+ set (CMAKE_CXX_FLAGS "-std=c++14 ${CMAKE_CXX_FLAGS}")
else ()
- set (CMAKE_CXX_FLAGS "-std=c++11 ${CMAKE_CXX_FLAGS}")
+ set (CMAKE_CXX_FLAGS "-std=c++14 ${CMAKE_CXX_FLAGS}")
endif ()
else ()
- set (CMAKE_CXX_STANDARD 11)
+ set (CMAKE_CXX_STANDARD 14)
endif ()
#======================== External Dependencies ===============================
diff --git a/experimental/kdtree_cpu.cpp b/experimental/kdtree_cpu.cpp
index 302b672..d63fcd3 100644
--- a/experimental/kdtree_cpu.cpp
+++ b/experimental/kdtree_cpu.cpp
@@ -31,6 +31,7 @@ SOFTWARE, EVEN IF ADVISED OF THE POSSIBILITY OF SUCH DAMAGE.
#include "nabo_experimental.h"
#include "../nabo/index_heap.h"
+#include <cassert>
#include <iostream>
#include <stdexcept>
#include <limits>
diff --git a/nabo/kdtree_cpu.cpp b/nabo/kdtree_cpu.cpp
index cb1f8d1..52a444f 100644
--- a/nabo/kdtree_cpu.cpp
+++ b/nabo/kdtree_cpu.cpp
@@ -37,6 +37,7 @@ SOFTWARE, EVEN IF ADVISED OF THE POSSIBILITY OF SUCH DAMAGE.
#include <queue>
#include <algorithm>
#include <utility>
+#include <cassert>
#ifdef HAVE_OPENMP
#include <omp.h>
#endif
diff --git a/nabo/kdtree_opencl.cpp b/nabo/kdtree_opencl.cpp
index 5a9fee2..fb1345f 100644
--- a/nabo/kdtree_opencl.cpp
+++ b/nabo/kdtree_opencl.cpp
@@ -33,6 +33,7 @@ SOFTWARE, EVEN IF ADVISED OF THE POSSIBILITY OF SUCH DAMAGE.
#include "nabo_private.h"
#include "index_heap.h"
+#include <cassert>
#include <iostream>
#include <sstream>
#include <fstream>
diff --git a/tests/knnshow.cpp b/tests/knnshow.cpp
index 6f4d3fc..c612378 100644
--- a/tests/knnshow.cpp
+++ b/tests/knnshow.cpp
@@ -30,6 +30,7 @@ SOFTWARE, EVEN IF ADVISED OF THE POSSIBILITY OF SUCH DAMAGE.
*/
#include "nabo/nabo.h"
+#include <cassert>
#include <iostream>
#include <fstream>
#include <stdexcept>
diff --git a/tests/knnvalidate.cpp b/tests/knnvalidate.cpp
index 2430249..2a7dcc4 100644
--- a/tests/knnvalidate.cpp
+++ b/tests/knnvalidate.cpp
@@ -32,6 +32,7 @@ SOFTWARE, EVEN IF ADVISED OF THE POSSIBILITY OF SUCH DAMAGE.
#include "nabo/nabo.h"
#include "helpers.h"
//#include "experimental/nabo_experimental.h"
+#include <cassert>
#include <iostream>
#include <fstream>
#include <stdexcept>
@@ -0,0 +1,32 @@
diff --git a/CMakeLists.txt b/CMakeLists.txt
index 9dabfd0..7b73418 100644
--- a/CMakeLists.txt
+++ b/CMakeLists.txt
@@ -128,9 +128,9 @@ endif()
#--------------------
# DEPENDENCY: boost
#--------------------
-find_package(Boost REQUIRED COMPONENTS thread system program_options date_time)
+find_package(Boost REQUIRED COMPONENTS thread program_options date_time)
if (Boost_MINOR_VERSION GREATER 47)
- find_package(Boost REQUIRED COMPONENTS thread system program_options date_time chrono)
+ find_package(Boost REQUIRED COMPONENTS thread program_options date_time chrono)
endif ()
#--------------------
diff --git a/libpointmatcherConfig.cmake.in b/libpointmatcherConfig.cmake.in
index 6de2c85..7c887fd 100644
--- a/libpointmatcherConfig.cmake.in
+++ b/libpointmatcherConfig.cmake.in
@@ -7,9 +7,9 @@
include(CMakeFindDependencyMacro)
find_dependency(libnabo REQUIRED)
find_dependency(yaml-cpp REQUIRED)
-find_package(Boost COMPONENTS thread system program_options date_time REQUIRED)
+find_package(Boost COMPONENTS thread program_options date_time REQUIRED)
if (Boost_MINOR_VERSION GREATER 47)
- find_package(Boost COMPONENTS thread system program_options date_time chrono REQUIRED)
+ find_package(Boost COMPONENTS thread program_options date_time chrono REQUIRED)
endif ()
include(${CMAKE_CURRENT_LIST_DIR}/libpointmatcher-config.cmake)
+82 -5
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@@ -26,19 +26,15 @@ jobs:
include:
- build_name: macos-sequoia-intel
os: macos-15-intel
extra_deps: ""
extra_cmake_def: '-DBUILD_AS_BUNDLE=ON'
- build_name: macos-sequoia-apple-silicon
os: macos-15
extra_deps: ""
extra_cmake_def: '-DBUILD_AS_BUNDLE=ON'
- build_name: macos-tahoe-intel
os: macos-26-intel
extra_deps: ""
extra_cmake_def: '-DBUILD_AS_BUNDLE=ON'
- build_name: macos-tahoe-apple-silicon
os: macos-26
extra_deps: ""
extra_cmake_def: '-DBUILD_AS_BUNDLE=ON'
steps:
@@ -47,7 +43,88 @@ jobs:
- name: Install Brew Dependencies
run: |
# Update brew and install from Brewfile if present, or specific packages
brew install pcl opencv octomap g2o pdal
brew install pcl opencv octomap g2o pdal yaml-cpp
- name: Resolve dependency versions
id: depver
# The source dependencies link against these Homebrew libraries and are
# compiled with Xcode's toolchain, so both are folded into the source-deps
# cache key: a Homebrew bump (e.g. a new Eigen) or an Xcode update
# invalidates the cache and forces a rebuild.
run: |
BREW=$(brew list --versions eigen boost yaml-cpp | sort)
XCODE=$(xcodebuild -version 2>/dev/null || clang --version | head -1)
HASH=$(printf '%s\n%s\n' "$BREW" "$XCODE" | shasum | cut -d' ' -f1)
echo "hash=$HASH" >> "$GITHUB_OUTPUT"
- name: Cache Source Dependencies
id: cache-src-deps
uses: actions/cache@v4
with:
# Staged install tree (DESTDIR) of the source-built dependencies.
path: ${{ runner.temp }}/deps-stage
# Rebuild when the OS image, pinned versions, patches, the linked
# Homebrew library versions or the Xcode toolchain change.
key: src-deps-${{ matrix.os }}-gtsam4.2.1-libnabo1.1.2-lpm1.4.4-deps${{ steps.depver.outputs.hash }}-${{ hashFiles('.github/patches/*.patch') }}
- name: Build Source Dependencies
# Dependencies not available (or not in a usable version) from Homebrew are
# built from source and staged into the cached directory via DESTDIR.
# Patches under .github/patches fix compatibility with the current Homebrew
# Eigen/Boost versions. Skipped entirely on a cache hit.
if: steps.cache-src-deps.outputs.cache-hit != 'true'
run: |
set -e
NPROC=$(sysctl -n hw.logicalcpu)
PATCHES="${{ github.workspace }}/.github/patches"
SRC="${{ runner.temp }}/src-deps"
STAGE="${{ runner.temp }}/deps-stage"
mkdir -p "$SRC" "$STAGE"
# --- GTSAM 4.2.1 ---
git clone --depth 1 --branch 4.2.1 https://github.com/borglab/gtsam.git "$SRC/gtsam"
cd "$SRC/gtsam"
git apply "$PATCHES/gtsam-4.2.1-eigen5.patch"
cmake -B build \
-DCMAKE_BUILD_TYPE=${{ env.BUILD_TYPE }} \
-DGTSAM_BUILD_WITH_MARCH_NATIVE=OFF \
-DGTSAM_WITH_TBB=OFF \
-DGTSAM_BUILD_EXAMPLES_ALWAYS=OFF \
-DGTSAM_BUILD_TESTS=OFF \
-DGTSAM_BUILD_UNSTABLE=OFF \
-DGTSAM_USE_SYSTEM_EIGEN=ON \
-DCMAKE_POLICY_VERSION_MINIMUM=3.5
cmake --build build -j$NPROC
DESTDIR="$STAGE" cmake --install build
# --- libnabo 1.1.2 (required by libpointmatcher) ---
git clone --depth 1 --branch 1.1.2 https://github.com/ethz-asl/libnabo.git "$SRC/libnabo"
cd "$SRC/libnabo"
git apply "$PATCHES/libnabo-1.1.2.patch"
cmake -B build -DCMAKE_BUILD_TYPE=${{ env.BUILD_TYPE }}
cmake --build build -j$NPROC
DESTDIR="$STAGE" cmake --install build
# --- libpointmatcher 1.4.4 (finds libnabo from the staged prefix) ---
git clone --depth 1 --branch 1.4.4 https://github.com/ethz-asl/libpointmatcher.git "$SRC/libpointmatcher"
cd "$SRC/libpointmatcher"
git apply "$PATCHES/libpointmatcher-1.4.4-boost.patch"
cmake -B build -DCMAKE_BUILD_TYPE=${{ env.BUILD_TYPE }} -DCMAKE_PREFIX_PATH="$STAGE/usr/local"
cmake --build build -j$NPROC
DESTDIR="$STAGE" cmake --install build
- name: Install Source Dependencies
# Copy the (possibly cached) staged install tree into /usr/local so
# rtabmap's find_package() and the bundle fixup (which search /usr/local)
# pick the dependencies up. Runs on both cache hit and miss.
run: |
set -e
STAGE="${{ runner.temp }}/deps-stage"
if [ ! -d "$STAGE/usr/local" ]; then
echo "No staged dependencies found at $STAGE/usr/local" >&2
exit 1
fi
sudo cp -a "$STAGE/usr/local/." /usr/local/
- name: Configure CMake
run: |