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* fix(DBDriver): resolve lock-order inversion between dbSafeAccess and trashes mutexes emptyTrashes() acquired _dbSafeAccessMutex while holding _trashesMutex (M1->M0), whereas the load() path acquires _dbSafeAccessMutex and then, inside loadQuery()->getLastWordId(), acquires _trashesMutex (M0->M1). This opposite nesting forms a lock-order cycle that ThreadSanitizer flags as a potential deadlock. Acquire _dbSafeAccessMutex only after releasing _trashesMutex, matching the sequential 'look in trash, then database' pattern used by every other DBDriver accessor (getLastWordId, getLastMapId, getInvertedIndexNi, ...). Refs: #1765 * Fxing the actual deadlock * Added doc * DBDriverSqlite3: deny usage of public trash mutex protected functions from internal query implementations --------- Co-authored-by: webzuweb <[email protected]>
356 lines
20 KiB
C++
356 lines
20 KiB
C++
/*
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Copyright (c) 2010-2016, Mathieu Labbe - IntRoLab - Universite de Sherbrooke
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All rights reserved.
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Redistribution and use in source and binary forms, with or without
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modification, are permitted provided that the following conditions are met:
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* Redistributions of source code must retain the above copyright
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notice, this list of conditions and the following disclaimer.
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* Redistributions in binary form must reproduce the above copyright
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notice, this list of conditions and the following disclaimer in the
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documentation and/or other materials provided with the distribution.
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* Neither the name of the Universite de Sherbrooke nor the
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names of its contributors may be used to endorse or promote products
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derived from this software without specific prior written permission.
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THIS SOFTWARE IS PROVIDED BY THE COPYRIGHT HOLDERS AND CONTRIBUTORS "AS IS" AND
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ANY EXPRESS OR IMPLIED WARRANTIES, INCLUDING, BUT NOT LIMITED TO, THE IMPLIED
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WARRANTIES OF MERCHANTABILITY AND FITNESS FOR A PARTICULAR PURPOSE ARE
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DISCLAIMED. IN NO EVENT SHALL THE COPYRIGHT HOLDER OR CONTRIBUTORS BE LIABLE FOR ANY
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DIRECT, INDIRECT, INCIDENTAL, SPECIAL, EXEMPLARY, OR CONSEQUENTIAL DAMAGES
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(INCLUDING, BUT NOT LIMITED TO, PROCUREMENT OF SUBSTITUTE GOODS OR SERVICES;
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LOSS OF USE, DATA, OR PROFITS; OR BUSINESS INTERRUPTION) HOWEVER CAUSED AND
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ON ANY THEORY OF LIABILITY, WHETHER IN CONTRACT, STRICT LIABILITY, OR TORT
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(INCLUDING NEGLIGENCE OR OTHERWISE) ARISING IN ANY WAY OUT OF THE USE OF THIS
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SOFTWARE, EVEN IF ADVISED OF THE POSSIBILITY OF SUCH DAMAGE.
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*/
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#ifndef DBDRIVERSQLITE3_H_
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#define DBDRIVERSQLITE3_H_
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#include "rtabmap/core/rtabmap_core_export.h" // DLL export/import defines
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#include "rtabmap/core/DBDriver.h"
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#if CV_MAJOR_VERSION < 5
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#include <opencv2/features2d/features2d.hpp>
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#else
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#include <opencv2/features.hpp>
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#endif
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typedef struct sqlite3_stmt sqlite3_stmt;
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typedef struct sqlite3 sqlite3;
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namespace rtabmap {
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/**
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* @class DBDriverSqlite3
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* @brief SQLite3 implementation of @ref DBDriver for RTAB-Map map databases.
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*
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* This is the default driver returned by @ref DBDriver::create(). It stores signatures,
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* links, visual words, statistics and sensor payloads in a single \c .db file using
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* the SQLite C API.
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*
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* **Storage modes**
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* - **File-backed** (default): the database is read/written directly on disk at @ref getUrl().
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* - **In-memory**: when @ref isInMemory() is true, SQLite uses \c :memory: and the file at
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* @ref getUrl() (if any) is loaded at open and optionally saved on @ref closeConnection().
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*
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* **SQLite PRAGMA tuning** (applied on connect and when setters are called while connected):
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* - @ref setCacheSize() — page cache size in pages
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* - @ref setJournalMode() — rollback journal mode (DELETE … OFF)
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* - @ref setSynchronous() — fsync policy (OFF / NORMAL / FULL)
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* - @ref setTempStore() — storage for temporary tables and indices
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*
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* Configure via @ref Parameters::kDbSqlite3InMemory(), @ref Parameters::kDbSqlite3CacheSize(),
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* @ref Parameters::kDbSqlite3JournalMode(), @ref Parameters::kDbSqlite3Synchronous() and
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* @ref Parameters::kDbSqlite3TempStore(), or call the setters directly.
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*
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* @see DBDriver
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* @see DBDriver::create()
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*/
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class RTABMAP_CORE_EXPORT DBDriverSqlite3: public DBDriver {
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public:
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/**
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* @brief Construct driver with optional SQLite-specific parameters.
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* @param parameters Map of parameters (see class description).
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*/
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DBDriverSqlite3(const ParametersMap & parameters = ParametersMap());
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virtual ~DBDriverSqlite3();
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/** @brief Apply SQLite parameters from the map; forwards to @ref DBDriver::parseParameters(). */
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virtual void parseParameters(const ParametersMap & parameters);
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/**
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* @brief True when the database runs in RAM instead of on disk.
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* @return True if @ref getUrl() is empty or @ref setDbInMemory() was used.
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*/
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virtual bool isInMemory() const {return getUrl().empty() || _dbInMemory;}
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/**
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* @brief Enable or disable in-memory mode.
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* If connected, the connection is closed and reopened with the new mode.
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*/
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void setDbInMemory(bool dbInMemory);
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/**
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* @brief Set SQLite rollback journal mode (`PRAGMA journal_mode`).
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*
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* Controls how SQLite stores the transaction journal used for atomic commit and rollback.
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* See https://www.sqlite.org/pragma.html#pragma_journal_mode
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*
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* @param journalMode Accepted values (invalid values are ignored). RTAB-Map default:
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* @ref Parameters::defaultDbSqlite3JournalMode() = **3 (MEMORY)** (@ref Parameters::kDbSqlite3JournalMode()).
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* - **0 — DELETE** (SQLite default): the journal file is deleted at the end of each transaction.
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* Good general-purpose balance of safety and speed.
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* - **1 — TRUNCATE**: the journal is truncated to zero length instead of being unlinked; can be
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* faster on some filesystems than DELETE.
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* - **2 — PERSIST**: the journal file is not deleted; only its header is zeroed after commit,
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* reducing create/delete overhead at the cost of always keeping a journal file on disk.
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* - **3 — MEMORY** (RTAB-Map default): the journal is held in RAM only (not written to disk). Faster, but the
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* database cannot be rolled back after a crash and may corrupt if the process dies mid-write.
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* - **4 — OFF**: no rollback journal. Fastest, but a crash or power loss during a write can
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* leave the database inconsistent; transactions cannot be rolled back atomically.
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*/
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void setJournalMode(int journalMode);
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/**
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* @brief Set the number of database pages kept in SQLite's page cache (`PRAGMA cache_size`).
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*
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* A larger cache reduces disk I/O when the working set fits in memory. The effective memory
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* is approximately `cacheSize * page_size` bytes (page size is usually 4096 bytes unless
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* changed with `PRAGMA page_size`). Only positive values are used (page count); see
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* https://www.sqlite.org/pragma.html#pragma_cache_size
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*
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* @param cacheSize Number of pages to cache. RTAB-Map default:
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* @ref Parameters::defaultDbSqlite3CacheSize() = **10000** (@ref Parameters::kDbSqlite3CacheSize()).
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*/
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void setCacheSize(unsigned int cacheSize);
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/**
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* @brief Set how aggressively SQLite syncs the database file to disk (`PRAGMA synchronous`).
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*
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* Trade-off between durability after a crash or power loss and write performance.
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* See https://www.sqlite.org/pragma.html#pragma_synchronous
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*
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* @param synchronous Accepted values (invalid values are ignored). RTAB-Map default:
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* @ref Parameters::defaultDbSqlite3Synchronous() = **0 (OFF)** (@ref Parameters::kDbSqlite3Synchronous()).
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* - **0 — OFF** (RTAB-Map default): SQLite does not wait for data to reach persistent storage. Fastest; a system
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* crash or power loss during a transaction may corrupt the database.
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* - **1 — NORMAL**: syncs at the most critical moments (SQLite default in many builds). A crash
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* may lose the last transaction but the database file structure usually stays valid.
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* - **2 — FULL**: syncs after every transaction commit. Slowest; strongest guarantee that a
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* committed transaction survives a power loss (when the OS honors fsync).
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*/
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void setSynchronous(int synchronous);
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/**
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* @brief Set where SQLite stores temporary tables and indices (`PRAGMA temp_store`).
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*
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* Affects internal temp storage used for some queries and operations, not RTAB-Map map data.
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* See https://www.sqlite.org/pragma.html#pragma_temp_store
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*
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* @param tempStore Accepted values (invalid values are ignored). RTAB-Map default:
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* @ref Parameters::defaultDbSqlite3TempStore() = **2 (MEMORY)** (@ref Parameters::kDbSqlite3TempStore()).
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* - **0 — DEFAULT**: use SQLite's compile-time default (often FILE, i.e. on-disk temp files).
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* - **1 — FILE**: store temporary tables and indices in temporary files in the directory
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* given by `PRAGMA temp_store_directory` or the system temp folder.
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* - **2 — MEMORY** (RTAB-Map default): store temporary tables and indices in RAM. Can speed up heavy queries
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* but increases memory use; large temp structures may still spill to disk depending on build.
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*/
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void setTempStore(int tempStore);
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protected:
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/**
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* @name Trash-checking DBDriver methods, hidden on purpose
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* @brief These public DBDriver methods lock the trash mutex. They are hidden here so that
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* *Query() implementations, which are called with the database mutex already locked,
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* cannot call them by mistake (it would invert the lock order with DBDriver::emptyTrashes()
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* and could deadlock). Call the corresponding *Query() method instead.
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*
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* To call them from outside, use a DBDriver pointer or reference (e.g., DBDriver::create()).
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* @{*/
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void asyncSave(Signature * s) = delete;
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void asyncSave(VisualWord * vw) = delete;
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void loadSignatures(const std::list<int> & ids, std::list<Signature *> & signatures, std::set<int> * loadedFromTrash = 0, bool loadWordIdsOnly = false) = delete;
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void loadWords(const std::set<int> & wordIds, std::list<VisualWord *> & vws) = delete;
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void loadNodeData(Signature & signature, bool images = true, bool scan = true, bool userData = true, bool occupancyGrid = true) const = delete;
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void loadNodeData(std::list<Signature *> & signatures, bool images = true, bool scan = true, bool userData = true, bool occupancyGrid = true) const = delete;
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void getNodeData(int signatureId, SensorData & data, bool images = true, bool scan = true, bool userData = true, bool occupancyGrid = true) const = delete;
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bool getCalibration(int signatureId, std::vector<CameraModel> & models, std::vector<StereoCameraModel> & stereoModels) const = delete;
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bool getLaserScanInfo(int signatureId, LaserScan & info) const = delete;
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bool getNodeInfo(int signatureId, Transform & pose, int & mapId, int & weight, std::string & label, double & stamp, Transform & groundTruthPose, std::vector<float> & velocity, GPS & gps, EnvSensors & sensors) const = delete;
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void getLocalFeatures(int signatureId, std::multimap<int, int> & words, std::vector<cv::KeyPoint> & keypoints, std::vector<cv::Point3f> & points, cv::Mat & descriptors) const = delete;
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void loadLinks(int signatureId, std::multimap<int, Link> & links, Link::Type type = Link::kUndef) const = delete;
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void getWeight(int signatureId, int & weight) const = delete;
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void getAllNodeIds(std::set<int> & ids, bool ignoreChildren = false, bool ignoreBadSignatures = false, bool ignoreIntermediateNodes = false) const = delete;
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void getAllOdomPoses(std::map<int, Transform> & poses, bool ignoreChildren = false, bool ignoreIntermediateNodes = false) const = delete;
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void getAllLinks(std::multimap<int, Link> & links, bool ignoreNullLinks = true, bool withLandmarks = false) const = delete;
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void getLastNodeId(int & id) const = delete;
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void getLastMapId(int & mapId) const = delete;
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void getLastWordId(int & id) const = delete;
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void getInvertedIndexNi(int signatureId, int & ni) const = delete;
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void getNodesObservingLandmark(int landmarkId, std::map<int, Link> & nodes) const = delete;
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void getNodeIdByLabel(const std::string & label, int & id) const = delete;
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void getAllLabels(std::map<int, std::string> & labels) const = delete;
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/** @} */
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virtual bool connectDatabaseQuery(const std::string & url, bool overwritten = false, bool readOnly = false);
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virtual void disconnectDatabaseQuery(bool save = true, const std::string & outputUrl = "");
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virtual bool isConnectedQuery() const;
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virtual unsigned long getMemoryUsedQuery() const; // In bytes
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virtual bool getDatabaseVersionQuery(std::string & version) const;
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virtual long getNodesMemoryUsedQuery() const;
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virtual long getLinksMemoryUsedQuery() const;
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virtual long getImagesMemoryUsedQuery() const;
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virtual long getDepthImagesMemoryUsedQuery() const;
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virtual long getCalibrationsMemoryUsedQuery() const;
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virtual long getGridsMemoryUsedQuery() const;
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virtual long getLaserScansMemoryUsedQuery() const;
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virtual long getUserDataMemoryUsedQuery() const;
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virtual long getWordsMemoryUsedQuery() const;
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virtual long getFeaturesMemoryUsedQuery() const;
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virtual long getStatisticsMemoryUsedQuery() const;
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virtual int getLastNodesSizeQuery() const;
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virtual int getLastDictionarySizeQuery() const;
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virtual int getTotalNodesSizeQuery() const;
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virtual int getTotalDictionarySizeQuery() const;
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virtual ParametersMap getLastParametersQuery() const;
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virtual std::map<std::string, float> getStatisticsQuery(int nodeId, double & stamp, std::vector<int> * wmState) const;
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virtual std::map<int, std::pair<std::map<std::string, float>, double> > getAllStatisticsQuery() const;
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virtual std::map<int, std::vector<int> > getAllStatisticsWmStatesQuery() const;
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virtual void executeNoResultQuery(const std::string & sql) const;
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virtual void getWeightQuery(int signatureId, int & weight) const;
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virtual void saveQuery(const std::list<Signature *> & signatures);
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virtual void saveQuery(const std::list<VisualWord *> & words) const;
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virtual void updateQuery(const std::list<Signature *> & signatures, bool updateTimestamp) const;
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virtual void updateQuery(const std::list<VisualWord *> & words, bool updateTimestamp) const;
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virtual void addLinkQuery(const Link & link) const;
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virtual void updateLinkQuery(const Link & link) const;
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virtual void updateOccupancyGridQuery(
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int nodeId,
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const cv::Mat & ground,
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const cv::Mat & obstacles,
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const cv::Mat & empty,
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float cellSize,
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const cv::Point3f & viewpoint) const;
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virtual void updateCalibrationQuery(
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int nodeId,
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const std::vector<CameraModel> & models,
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const std::vector<StereoCameraModel> & stereoModels) const;
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virtual void updateDepthImageQuery(
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int nodeId,
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const cv::Mat & image,
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const std::string & format) const;
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void updateLaserScanQuery(
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int nodeId,
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const LaserScan & scan) const;
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virtual void addStatisticsQuery(const Statistics & statistics, bool saveWmState) const;
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virtual void savePreviewImageQuery(const cv::Mat & image) const;
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virtual cv::Mat loadPreviewImageQuery() const;
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virtual void saveOptimizedPosesQuery(const std::map<int, Transform> & optimizedPoses, const Transform & lastlocalizationPose) const;
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virtual std::map<int, Transform> loadOptimizedPosesQuery(Transform * lastlocalizationPose = 0) const;
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virtual void save2DMapQuery(const cv::Mat & map, float xMin, float yMin, float cellSize) const;
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virtual cv::Mat load2DMapQuery(float & xMin, float & yMin, float & cellSize) const;
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virtual void saveOptimizedMeshQuery(
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const cv::Mat & cloud,
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const std::vector<std::vector<std::vector<RTABMAP_PCL_INDEX> > > & polygons,
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#if PCL_VERSION_COMPARE(>=, 1, 8, 0)
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const std::vector<std::vector<Eigen::Vector2f, Eigen::aligned_allocator<Eigen::Vector2f> > > & texCoords,
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#else
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const std::vector<std::vector<Eigen::Vector2f> > & texCoords,
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#endif
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const cv::Mat & textures) const;
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virtual cv::Mat loadOptimizedMeshQuery(
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std::vector<std::vector<std::vector<RTABMAP_PCL_INDEX> > > * polygons,
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#if PCL_VERSION_COMPARE(>=, 1, 8, 0)
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std::vector<std::vector<Eigen::Vector2f, Eigen::aligned_allocator<Eigen::Vector2f> > > * texCoords,
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#else
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std::vector<std::vector<Eigen::Vector2f> > * texCoords,
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#endif
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cv::Mat * textures) const;
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virtual void saveFlannIndexQuery(const std::vector<unsigned char> & indexData) const;
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// Load objects
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virtual void loadQuery(VWDictionary & dictionary, bool lastStateOnly = true, bool idsOnly = false) const;
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virtual void loadLastNodesQuery(std::list<Signature *> & signatures, bool loadWordIdsOnly) const;
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virtual void loadSignaturesQuery(const std::list<int> & ids, std::list<Signature *> & signatures, bool loadWordIdsOnly) const;
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virtual void loadWordsQuery(const std::set<int> & wordIds, std::list<VisualWord *> & vws) const;
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virtual void loadLinksQuery(int signatureId, std::multimap<int, Link> & links, Link::Type type = Link::kUndef) const;
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virtual void loadNodeDataQuery(std::list<Signature *> & signatures, bool images=true, bool scan=true, bool userData=true, bool occupancyGrid=true) const;
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virtual bool getCalibrationQuery(int signatureId, std::vector<CameraModel> & models, std::vector<StereoCameraModel> & stereoModels) const;
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virtual bool getLaserScanInfoQuery(int signatureId, LaserScan & info) const;
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virtual bool getNodeInfoQuery(int signatureId, Transform & pose, int & mapId, int & weight, std::string & label, double & stamp, Transform & groundTruthPose, std::vector<float> & velocity, GPS & gps, EnvSensors & sensors) const;
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virtual void getLocalFeaturesQuery(int signatureId, std::multimap<int, int> & words, std::vector<cv::KeyPoint> & keypoints, std::vector<cv::Point3f> & points, cv::Mat & descriptors) const;
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virtual void getLastNodeIdsQuery(std::set<int> & ids) const;
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virtual void getAllNodeIdsQuery(std::set<int> & ids, bool ignoreChildren, bool ignoreBadSignatures, bool ignoreIntermediateNodes) const;
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virtual void getAllOdomPosesQuery(std::map<int, Transform> & poses, bool ignoreChildren, bool ignoreIntermediateNodes) const;
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virtual void getAllLinksQuery(std::multimap<int, Link> & links, bool ignoreNullLinks, bool withLandmarks) const;
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virtual void getLastIdQuery(const std::string & tableName, int & id, const std::string & fieldName="id") const;
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virtual void getInvertedIndexNiQuery(int signatureId, int & ni) const;
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virtual void getNodesObservingLandmarkQuery(int landmarkId, std::map<int, Link> & nodes) const;
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virtual void getNodeIdByLabelQuery(const std::string & label, int & id) const;
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virtual void getAllLabelsQuery(std::map<int, std::string> & labels) const;
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private:
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std::string queryStepNode() const;
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std::string queryStepImage() const;
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std::string queryStepDepth() const;
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std::string queryStepCalibrationUpdate() const;
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std::string queryStepDepthUpdate() const;
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std::string queryStepScanUpdate() const;
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std::string queryStepSensorData() const;
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std::string queryStepLinkUpdate() const;
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std::string queryStepLink() const;
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std::string queryStepWordsChanged() const;
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std::string queryStepKeypoint() const;
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std::string queryStepGlobalDescriptor() const;
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std::string queryStepOccupancyGridUpdate() const;
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void stepNode(sqlite3_stmt * ppStmt, const Signature * s) const;
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void stepImage(sqlite3_stmt * ppStmt, int id, const cv::Mat & imageBytes) const;
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void stepDepth(sqlite3_stmt * ppStmt, const SensorData & sensorData) const;
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void stepCalibrationUpdate(sqlite3_stmt * ppStmt, int nodeId, const std::vector<CameraModel> & models, const std::vector<StereoCameraModel> & stereoModels) const;
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void stepDepthUpdate(sqlite3_stmt * ppStmt, int nodeId, const cv::Mat & image, const std::string & format) const;
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void stepScanUpdate(sqlite3_stmt * ppStmt, int nodeId, const LaserScan & image) const;
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void stepSensorData(sqlite3_stmt * ppStmt, const SensorData & sensorData) const;
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void stepLink(sqlite3_stmt * ppStmt, const Link & link) const;
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void stepWordsChanged(sqlite3_stmt * ppStmt, int signatureId, int oldWordId, int newWordId) const;
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void stepKeypoint(sqlite3_stmt * ppStmt, int nodeID, int wordId, const cv::KeyPoint & kp, const cv::Point3f & pt, const cv::Mat & descriptor) const;
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void stepGlobalDescriptor(sqlite3_stmt * ppStmt, int nodeId, const GlobalDescriptor & descriptor) const;
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void stepOccupancyGridUpdate(sqlite3_stmt * ppStmt,
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int nodeId,
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const cv::Mat & ground,
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const cv::Mat & obstacles,
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const cv::Mat & empty,
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float cellSize,
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const cv::Point3f & viewpoint) const;
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private:
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void loadWordsQuery(std::list<Signature *> & signatures) const;
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void loadWordIdsQuery(std::list<Signature *> & signatures) const;
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void loadLinksQuery(std::list<Signature *> & signatures) const;
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int loadOrSaveDb(sqlite3 *pInMemory, const std::string & fileName, int isSave) const;
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protected:
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sqlite3 * _ppDb; ///< Open SQLite connection (null when disconnected)
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std::string _version; ///< Schema version read from the database
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private:
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unsigned long _memoryUsedEstimate;
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bool _dbInMemory;
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unsigned int _cacheSize;
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int _journalMode;
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int _synchronous;
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int _tempStore;
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};
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}
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#endif /* DBDRIVERSQLITE3_H_ */
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