Moved some common include files to public headers folder

This commit is contained in:
matlabbe
2015-08-25 10:32:27 -04:00
parent 0ac79d0e8f
commit 0cf1ea8777
39 changed files with 103 additions and 89 deletions

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@@ -25,7 +25,7 @@ ON ANY THEORY OF LIABILITY, WHETHER IN CONTRACT, STRICT LIABILITY, OR TORT
SOFTWARE, EVEN IF ADVISED OF THE POSSIBILITY OF SUCH DAMAGE.
*/
#include "BayesFilter.h"
#include "rtabmap/core/BayesFilter.h"
#include "rtabmap/core/Memory.h"
#include "rtabmap/core/Signature.h"
#include "rtabmap/core/Parameters.h"

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@@ -1,87 +0,0 @@
/*
Copyright (c) 2010-2014, Mathieu Labbe - IntRoLab - Universite de Sherbrooke
All rights reserved.
Redistribution and use in source and binary forms, with or without
modification, are permitted provided that the following conditions are met:
* Redistributions of source code must retain the above copyright
notice, this list of conditions and the following disclaimer.
* Redistributions in binary form must reproduce the above copyright
notice, this list of conditions and the following disclaimer in the
documentation and/or other materials provided with the distribution.
* Neither the name of the Universite de Sherbrooke nor the
names of its contributors may be used to endorse or promote products
derived from this software without specific prior written permission.
THIS SOFTWARE IS PROVIDED BY THE COPYRIGHT HOLDERS AND CONTRIBUTORS "AS IS" AND
ANY EXPRESS OR IMPLIED WARRANTIES, INCLUDING, BUT NOT LIMITED TO, THE IMPLIED
WARRANTIES OF MERCHANTABILITY AND FITNESS FOR A PARTICULAR PURPOSE ARE
DISCLAIMED. IN NO EVENT SHALL THE COPYRIGHT HOLDER OR CONTRIBUTORS BE LIABLE FOR ANY
DIRECT, INDIRECT, INCIDENTAL, SPECIAL, EXEMPLARY, OR CONSEQUENTIAL DAMAGES
(INCLUDING, BUT NOT LIMITED TO, PROCUREMENT OF SUBSTITUTE GOODS OR SERVICES;
LOSS OF USE, DATA, OR PROFITS; OR BUSINESS INTERRUPTION) HOWEVER CAUSED AND
ON ANY THEORY OF LIABILITY, WHETHER IN CONTRACT, STRICT LIABILITY, OR TORT
(INCLUDING NEGLIGENCE OR OTHERWISE) ARISING IN ANY WAY OUT OF THE USE OF THIS
SOFTWARE, EVEN IF ADVISED OF THE POSSIBILITY OF SUCH DAMAGE.
*/
#ifndef BAYESFILTER_H_
#define BAYESFILTER_H_
#include "rtabmap/core/RtabmapExp.h" // DLL export/import defines
#include <opencv2/core/core.hpp>
#include <list>
#include <set>
#include "rtabmap/utilite/UEventsHandler.h"
#include "rtabmap/core/Parameters.h"
namespace rtabmap {
class Memory;
class Signature;
class RTABMAP_EXP BayesFilter
{
public:
BayesFilter(const ParametersMap & parameters = ParametersMap());
virtual ~BayesFilter();
virtual void parseParameters(const ParametersMap & parameters);
const std::map<int, float> & computePosterior(const Memory * memory, const std::map<int, float> & likelihood);
void reset();
//setters
void setPredictionLC(const std::string & prediction);
//getters
const std::map<int, float> & getPosterior() const {return _posterior;}
float getVirtualPlacePrior() const {return _virtualPlacePrior;}
const std::vector<double> & getPredictionLC() const; // {Vp, Lc, l1, l2, l3, l4...}
std::string getPredictionLCStr() const; // for convenience {Vp, Lc, l1, l2, l3, l4...}
cv::Mat generatePrediction(const Memory * memory, const std::vector<int> & ids) const;
private:
cv::Mat updatePrediction(const cv::Mat & oldPrediction,
const Memory * memory,
const std::vector<int> & oldIds,
const std::vector<int> & newIds) const;
void updatePosterior(const Memory * memory, const std::vector<int> & likelihoodIds);
float addNeighborProb(cv::Mat & prediction,
unsigned int col,
const std::map<int, int> & neighbors,
const std::map<int, int> & idToIndexMap) const;
void normalize(cv::Mat & prediction, unsigned int index, float addedProbabilitiesSum, bool virtualPlaceUsed) const;
private:
std::map<int, float> _posterior;
cv::Mat _prediction;
float _virtualPlacePrior;
std::vector<double> _predictionLC; // {Vp, Lc, l1, l2, l3, l4...}
bool _fullPredictionUpdate;
float _totalPredictionLCValues;
};
} // namespace rtabmap
#endif /* BAYESFILTER_H_ */

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@@ -28,7 +28,7 @@ SOFTWARE, EVEN IF ADVISED OF THE POSSIBILITY OF SUCH DAMAGE.
#include "rtabmap/core/DBDriver.h"
#include "rtabmap/core/Signature.h"
#include "VisualWord.h"
#include "rtabmap/core/VisualWord.h"
#include "rtabmap/utilite/UConversion.h"
#include "rtabmap/utilite/UMath.h"
#include "rtabmap/utilite/ULogger.h"

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@@ -28,7 +28,7 @@ SOFTWARE, EVEN IF ADVISED OF THE POSSIBILITY OF SUCH DAMAGE.
#include "DBDriverSqlite3.h"
#include "rtabmap/core/Signature.h"
#include "VisualWord.h"
#include "rtabmap/core/VisualWord.h"
#include "rtabmap/core/VWDictionary.h"
#include "rtabmap/core/util3d.h"
#include "rtabmap/core/Compression.h"

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@@ -38,7 +38,7 @@ SOFTWARE, EVEN IF ADVISED OF THE POSSIBILITY OF SUCH DAMAGE.
#include "rtabmap/core/RtabmapEvent.h"
#include "rtabmap/core/VWDictionary.h"
#include <rtabmap/core/EpipolarGeometry.h>
#include "VisualWord.h"
#include "rtabmap/core/VisualWord.h"
#include "rtabmap/core/Features2d.h"
#include "DBDriverSqlite3.h"
#include "rtabmap/core/util3d_features.h"

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@@ -30,7 +30,7 @@ SOFTWARE, EVEN IF ADVISED OF THE POSSIBILITY OF SUCH DAMAGE.
#include "rtabmap/utilite/ULogger.h"
#include "rtabmap/utilite/UTimer.h"
#include "rtabmap/utilite/UConversion.h"
#include "ParticleFilter.h"
#include "rtabmap/core/ParticleFilter.h"
namespace rtabmap {

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@@ -1,177 +0,0 @@
/*
Copyright (c) 2010-2015, Mathieu Labbe - IntRoLab - Universite de Sherbrooke
All rights reserved.
Redistribution and use in source and binary forms, with or without
modification, are permitted provided that the following conditions are met:
* Redistributions of source code must retain the above copyright
notice, this list of conditions and the following disclaimer.
* Redistributions in binary form must reproduce the above copyright
notice, this list of conditions and the following disclaimer in the
documentation and/or other materials provided with the distribution.
* Neither the name of the Universite de Sherbrooke nor the
names of its contributors may be used to endorse or promote products
derived from this software without specific prior written permission.
THIS SOFTWARE IS PROVIDED BY THE COPYRIGHT HOLDERS AND CONTRIBUTORS "AS IS" AND
ANY EXPRESS OR IMPLIED WARRANTIES, INCLUDING, BUT NOT LIMITED TO, THE IMPLIED
WARRANTIES OF MERCHANTABILITY AND FITNESS FOR A PARTICULAR PURPOSE ARE
DISCLAIMED. IN NO EVENT SHALL THE COPYRIGHT HOLDER OR CONTRIBUTORS BE LIABLE FOR ANY
DIRECT, INDIRECT, INCIDENTAL, SPECIAL, EXEMPLARY, OR CONSEQUENTIAL DAMAGES
(INCLUDING, BUT NOT LIMITED TO, PROCUREMENT OF SUBSTITUTE GOODS OR SERVICES;
LOSS OF USE, DATA, OR PROFITS; OR BUSINESS INTERRUPTION) HOWEVER CAUSED AND
ON ANY THEORY OF LIABILITY, WHETHER IN CONTRACT, STRICT LIABILITY, OR TORT
(INCLUDING NEGLIGENCE OR OTHERWISE) ARISING IN ANY WAY OUT OF THE USE OF THIS
SOFTWARE, EVEN IF ADVISED OF THE POSSIBILITY OF SUCH DAMAGE.
*/
#ifndef PARTICLEFILTER_H_
#define PARTICLEFILTER_H_
#include <rtabmap/utilite/UMath.h>
#include <rtabmap/utilite/ULogger.h>
namespace rtabmap {
// taken from http://www.developpez.net/forums/d544518/c-cpp/c/equivalent-randn-matlab-c/
#define TWOPI (6.2831853071795864769252867665590057683943387987502) /* 2 * pi */
/*
RAND is a macro which returns a pseudo-random numbers from a uniform
distribution on the interval [0 1]
*/
#define RAND (rand())/((double) RAND_MAX)
/*
RANDN is a macro which returns a pseudo-random numbers from a normal
distribution with mean zero and standard deviation one. This macro uses Box
Muller's algorithm
*/
#define RANDN (sqrt(-2.0*log(RAND))*cos(TWOPI*RAND))
std::vector<double> cumSum(const std::vector<double> & v)
{
std::vector<double> cum(v.size());
double sum = 0;
for(unsigned int i=0; i<v.size(); ++i)
{
cum[i] = v[i] + sum;
sum += v[i];
}
return cum;
}
std::vector<double> resample(const std::vector<double> & p, // particles
const std::vector<double> & w, // weights
bool normalizeWeights = false)
{
std::vector<double> np; //new particles
if(p.size() != w.size() || p.size() == 0)
{
UERROR("particles (%d) and weights (%d) are not the same size", p.size(), w.size());
return np;
}
std::vector<double> cs;
if(normalizeWeights)
{
double wSum = uSum(w);
std::vector<double> wNorm(w.size());
for(unsigned int i=0; i<w.size(); ++i)
{
wNorm[i] = w[i]/wSum;
}
cs = cumSum(wNorm); // cumulative sum
}
else
{
cs = cumSum(w); // cumulative sum
}
for(unsigned int j=0; j<cs.size(); ++j)
{
cs[j]/=cs.back();
}
np.resize(p.size());
for(unsigned int i=0; i<np.size(); ++i)
{
unsigned int index = 0;
double randnum = RAND;
for(unsigned int j=0; j<cs.size(); ++j)
{
if(randnum < cs[j])
{
index = j;
break;
}
}
np[i] = p[index];
}
return np;
}
class ParticleFilter
{
public:
ParticleFilter(unsigned int nParticles = 200,
double noise = 0.1,
double lambda = 10.0,
double initValue = 0.0) :
noise_(noise),
lambda_(lambda)
{
particles_.resize(nParticles, initValue);
}
void init(double initValue = 0.0f)
{
particles_ = std::vector<double>(particles_.size(), initValue);
}
double filter(double val)
{
std::vector<double> weights(particles_.size(), 1);
double sumWeights = 0;
for(unsigned int i=0; i<particles_.size(); ++i)
{
// add noise to particle
particles_[i] += noise_ * RANDN;
// compute weight
double dist = fabs(particles_[i] - val);
//dist = sqrt(dist*dist);
double w = exp(-lambda_*dist);
if(uIsFinite(w) && w > 0)
{
weights[i] = w;
}
sumWeights += weights[i];
}
//normalize and compute estimated value
double value =0.0;
for(unsigned int i=0; i<weights.size(); ++i)
{
weights[i] /= sumWeights;
value += weights[i] * particles_[i];
}
//resample the particles
particles_ = resample(particles_, weights, false);
return value;
}
private:
std::vector<double> particles_;
double noise_;
double lambda_;
};
}
#endif /* PARTICLEFILTER_H_ */

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@@ -35,7 +35,7 @@ SOFTWARE, EVEN IF ADVISED OF THE POSSIBILITY OF SUCH DAMAGE.
#include "rtabmap/core/Memory.h"
#include "rtabmap/core/VWDictionary.h"
#include "BayesFilter.h"
#include "rtabmap/core/BayesFilter.h"
#include <rtabmap/utilite/ULogger.h>
#include <rtabmap/utilite/UFile.h>

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@@ -26,7 +26,7 @@ SOFTWARE, EVEN IF ADVISED OF THE POSSIBILITY OF SUCH DAMAGE.
*/
#include "rtabmap/core/VWDictionary.h"
#include "VisualWord.h"
#include "rtabmap/core/VisualWord.h"
#include "rtabmap/core/Signature.h"
#include "rtabmap/core/DBDriver.h"

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@@ -25,7 +25,7 @@ ON ANY THEORY OF LIABILITY, WHETHER IN CONTRACT, STRICT LIABILITY, OR TORT
SOFTWARE, EVEN IF ADVISED OF THE POSSIBILITY OF SUCH DAMAGE.
*/
#include "VisualWord.h"
#include "rtabmap/core/VisualWord.h"
#include "rtabmap/utilite/ULogger.h"
#include "rtabmap/utilite/UStl.h"

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@@ -1,65 +0,0 @@
/*
Copyright (c) 2010-2014, Mathieu Labbe - IntRoLab - Universite de Sherbrooke
All rights reserved.
Redistribution and use in source and binary forms, with or without
modification, are permitted provided that the following conditions are met:
* Redistributions of source code must retain the above copyright
notice, this list of conditions and the following disclaimer.
* Redistributions in binary form must reproduce the above copyright
notice, this list of conditions and the following disclaimer in the
documentation and/or other materials provided with the distribution.
* Neither the name of the Universite de Sherbrooke nor the
names of its contributors may be used to endorse or promote products
derived from this software without specific prior written permission.
THIS SOFTWARE IS PROVIDED BY THE COPYRIGHT HOLDERS AND CONTRIBUTORS "AS IS" AND
ANY EXPRESS OR IMPLIED WARRANTIES, INCLUDING, BUT NOT LIMITED TO, THE IMPLIED
WARRANTIES OF MERCHANTABILITY AND FITNESS FOR A PARTICULAR PURPOSE ARE
DISCLAIMED. IN NO EVENT SHALL THE COPYRIGHT HOLDER OR CONTRIBUTORS BE LIABLE FOR ANY
DIRECT, INDIRECT, INCIDENTAL, SPECIAL, EXEMPLARY, OR CONSEQUENTIAL DAMAGES
(INCLUDING, BUT NOT LIMITED TO, PROCUREMENT OF SUBSTITUTE GOODS OR SERVICES;
LOSS OF USE, DATA, OR PROFITS; OR BUSINESS INTERRUPTION) HOWEVER CAUSED AND
ON ANY THEORY OF LIABILITY, WHETHER IN CONTRACT, STRICT LIABILITY, OR TORT
(INCLUDING NEGLIGENCE OR OTHERWISE) ARISING IN ANY WAY OUT OF THE USE OF THIS
SOFTWARE, EVEN IF ADVISED OF THE POSSIBILITY OF SUCH DAMAGE.
*/
#pragma once
#include "rtabmap/core/RtabmapExp.h" // DLL export/import defines
#include <opencv2/core/core.hpp>
#include <map>
namespace rtabmap
{
class RTABMAP_EXP VisualWord
{
public:
VisualWord(int id, const cv::Mat & descriptor, int signatureId = 0);
~VisualWord();
void addRef(int signatureId);
int removeAllRef(int signatureId);
int getTotalReferences() const {return _totalReferences;}
int id() const {return _id;}
const cv::Mat & getDescriptor() const {return _descriptor;}
const std::map<int, int> & getReferences() const {return _references;} // (signature id , occurrence in the signature)
bool isSaved() const {return _saved;}
void setSaved(bool saved) {_saved = saved;}
private:
int _id;
cv::Mat _descriptor;
bool _saved; // If it's saved to db
int _totalReferences;
std::map<int, int> _references; // (signature id , occurrence in the signature)
std::map<int, int> _oldReferences; // (signature id , occurrence in the signature)
};
} // namespace rtabmap